mirror of
https://github.com/NixOS/nixpkgs.git
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109 lines
2 KiB
Nix
109 lines
2 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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# dependencies
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google-generativeai,
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joblib,
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networkx,
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numpy,
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opt-einsum,
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pandas,
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pyparsing,
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pyro-ppl,
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scikit-base,
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scikit-learn,
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scipy,
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statsmodels,
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torch,
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tqdm,
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xgboost,
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# tests
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pytestCheckHook,
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pytest-cov-stub,
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mock,
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writableTmpDirAsHomeHook,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "pgmpy";
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version = "1.1.2";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "pgmpy";
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repo = "pgmpy";
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rev = "197e1e0444c77c00581a4c32763811e5b03f8503";
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hash = "sha256-TCnn3GrITW8HCrYVeeythiULV130b6uulkijkPpJOqA=";
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};
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dependencies = [
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google-generativeai
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joblib
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networkx
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numpy
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opt-einsum
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pandas
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pyparsing
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pyro-ppl
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scikit-base
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scikit-learn
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scipy
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statsmodels
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torch
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tqdm
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xgboost
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];
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disabledTests = [
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# flaky:
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# AssertionError: -45.78899127622197 != -45.788991276221964
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"test_score"
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# self.assertTrue(np.isclose(coef, dep_coefs[i], atol=1e-4))
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# AssertionError: False is not true
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"test_pillai"
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# requires optional dependency daft
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"test_to_daft"
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# AssertionError
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"test_estimate_example_smoke_test"
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"test_gcm"
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];
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enabledTestPaths = [
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"pgmpy/tests"
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];
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disabledTestPaths = [
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# requires network access
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"pgmpy/tests/test_datasets"
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# Very slow
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"pgmpy/tests/test_estimators"
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"pgmpy/tests/test_models"
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];
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nativeCheckInputs = [
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pytestCheckHook
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# xdoctest
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pytest-cov-stub
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mock
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writableTmpDirAsHomeHook
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];
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pythonImportsCheck = [ "pgmpy" ];
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meta = {
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description = "Python Library for learning (Structure and Parameter), inference (Probabilistic and Causal), and simulations in Bayesian Networks";
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homepage = "https://github.com/pgmpy/pgmpy";
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# changelog = "https://github.com/pgmpy/pgmpy/releases/tag/${finalAttrs.src.tag}";
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license = lib.licenses.mit;
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maintainers = with lib.maintainers; [
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happysalada
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sarahec
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];
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};
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})
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